Members of the plant NIMA-related kinases are involved in organ development and vascularization in poplar, Arabidopsis and rice.
Identifieur interne : 003B25 ( Main/Exploration ); précédent : 003B24; suivant : 003B26Members of the plant NIMA-related kinases are involved in organ development and vascularization in poplar, Arabidopsis and rice.
Auteurs : Frédéric Vigneault [Canada] ; Denis Lachance ; Monikca Cloutier ; Gervais Pelletier ; Caroline Levasseur ; Armand SéguinSource :
- The Plant journal : for cell and molecular biology [ 0960-7412 ] ; 2007.
Descripteurs français
- KwdFr :
- Arabidopsis (croissance et développement), Arabidopsis (enzymologie), Arabidopsis (génétique), Duplication de gène (MeSH), Exons (MeSH), Famille multigénique (MeSH), Génome végétal (MeSH), Introns (MeSH), Oryza (croissance et développement), Oryza (enzymologie), Oryza (génétique), Phylogenèse (MeSH), Populus (croissance et développement), Populus (enzymologie), Populus (génétique), Protein-Serine-Threonine Kinases (génétique), Protein-Serine-Threonine Kinases (métabolisme), Protéines de fusion recombinantes (génétique), Protéines de fusion recombinantes (métabolisme), Protéines végétales (génétique), Protéines végétales (métabolisme), Protéines végétales (physiologie), Régulation de l'expression des gènes au cours du développement (MeSH), Régulation de l'expression des gènes végétaux (MeSH), Végétaux génétiquement modifiés (MeSH), Évolution moléculaire (MeSH).
- MESH :
- croissance et développement : Arabidopsis, Oryza, Populus.
- enzymologie : Arabidopsis, Oryza, Populus.
- génétique : Arabidopsis, Oryza, Populus, Protein-Serine-Threonine Kinases, Protéines de fusion recombinantes, Protéines végétales.
- métabolisme : Protein-Serine-Threonine Kinases, Protéines de fusion recombinantes, Protéines végétales.
- physiologie : Protéines végétales.
- Duplication de gène, Exons, Famille multigénique, Génome végétal, Introns, Phylogenèse, Régulation de l'expression des gènes au cours du développement, Régulation de l'expression des gènes végétaux, Végétaux génétiquement modifiés, Évolution moléculaire.
English descriptors
- KwdEn :
- Arabidopsis (enzymology), Arabidopsis (genetics), Arabidopsis (growth & development), Evolution, Molecular (MeSH), Exons (MeSH), Gene Duplication (MeSH), Gene Expression Regulation, Developmental (MeSH), Gene Expression Regulation, Plant (MeSH), Genome, Plant (MeSH), Introns (MeSH), Multigene Family (MeSH), Oryza (enzymology), Oryza (genetics), Oryza (growth & development), Phylogeny (MeSH), Plant Proteins (genetics), Plant Proteins (metabolism), Plant Proteins (physiology), Plants, Genetically Modified (MeSH), Populus (enzymology), Populus (genetics), Populus (growth & development), Protein-Serine-Threonine Kinases (genetics), Protein-Serine-Threonine Kinases (metabolism), Recombinant Fusion Proteins (genetics), Recombinant Fusion Proteins (metabolism).
- MESH :
- chemical , genetics : Plant Proteins, Protein-Serine-Threonine Kinases, Recombinant Fusion Proteins.
- enzymology : Arabidopsis, Oryza, Populus.
- genetics : Arabidopsis, Oryza, Populus.
- growth & development : Arabidopsis, Oryza, Populus.
- chemical , metabolism : Plant Proteins, Protein-Serine-Threonine Kinases, Recombinant Fusion Proteins.
- chemical , physiology : Plant Proteins.
- Evolution, Molecular, Exons, Gene Duplication, Gene Expression Regulation, Developmental, Gene Expression Regulation, Plant, Genome, Plant, Introns, Multigene Family, Phylogeny, Plants, Genetically Modified.
Abstract
NIMA-related kinases (Neks) are a family of serine/threonine kinases that have been linked to cell-cycle regulation in fungi and mammals. Information regarding the function of Neks in plants is very limited. We screened the three plant species that have had their genomes sequenced in an attempt to improve our understanding of their role in plants. We retrieved seven members in Arabidopsis thaliana, nine in Populus trichocarpa and six in Oryza sativa. Phylogenetic analysis showed that plant Neks are closely related to each other and contain paralogous genes. Moreover, their chromosome distribution and their exon-intron structure revealed that the actual plant Nek family was derived from a single representative followed by large segmental duplication events. Functional expression analyses in the three species relied on RTqPCR in poplar and publicly available microarray data for Arabidopsis and rice. Although plant Neks are present in every organ analyzed, their expression profiles suggest their involvement in plant development processes. Furthermore, we showed that PNek1, a member of the poplar family, is expressed at sites of free auxin synthesis and is specifically involved during the vascularization process.
DOI: 10.1111/j.1365-313x.2007.03161.x
PubMed: 17886359
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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moléculaire</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">NIMA-related kinases (Neks) are a family of serine/threonine kinases that have been linked to cell-cycle regulation in fungi and mammals. Information regarding the function of Neks in plants is very limited. We screened the three plant species that have had their genomes sequenced in an attempt to improve our understanding of their role in plants. We retrieved seven members in Arabidopsis thaliana, nine in Populus trichocarpa and six in Oryza sativa. Phylogenetic analysis showed that plant Neks are closely related to each other and contain paralogous genes. Moreover, their chromosome distribution and their exon-intron structure revealed that the actual plant Nek family was derived from a single representative followed by large segmental duplication events. Functional expression analyses in the three species relied on RTqPCR in poplar and publicly available microarray data for Arabidopsis and rice. Although plant Neks are present in every organ analyzed, their expression profiles suggest their involvement in plant development processes. Furthermore, we showed that PNek1, a member of the poplar family, is expressed at sites of free auxin synthesis and is specifically involved during the vascularization process.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">17886359</PMID><DateCompleted><Year>2007</Year><Month>12</Month><Day>03</Day></DateCompleted><DateRevised><Year>2019</Year><Month>09</Month><Day>07</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">0960-7412</ISSN><JournalIssue CitedMedium="Print"><Volume>51</Volume><Issue>4</Issue><PubDate><Year>2007</Year><Month>Aug</Month></PubDate></JournalIssue><Title>The Plant journal : for cell and molecular biology</Title><ISOAbbreviation>Plant J</ISOAbbreviation></Journal><ArticleTitle>Members of the plant NIMA-related kinases are involved in organ development and vascularization in poplar, Arabidopsis and rice.</ArticleTitle><Pagination><MedlinePgn>575-88</MedlinePgn></Pagination><Abstract><AbstractText>NIMA-related kinases (Neks) are a family of serine/threonine kinases that have been linked to cell-cycle regulation in fungi and mammals. Information regarding the function of Neks in plants is very limited. We screened the three plant species that have had their genomes sequenced in an attempt to improve our understanding of their role in plants. We retrieved seven members in Arabidopsis thaliana, nine in Populus trichocarpa and six in Oryza sativa. Phylogenetic analysis showed that plant Neks are closely related to each other and contain paralogous genes. Moreover, their chromosome distribution and their exon-intron structure revealed that the actual plant Nek family was derived from a single representative followed by large segmental duplication events. Functional expression analyses in the three species relied on RTqPCR in poplar and publicly available microarray data for Arabidopsis and rice. Although plant Neks are present in every organ analyzed, their expression profiles suggest their involvement in plant development processes. Furthermore, we showed that PNek1, a member of the poplar family, is expressed at sites of free auxin synthesis and is specifically involved during the vascularization process.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Vigneault</LastName><ForeName>Frédéric</ForeName><Initials>F</Initials><AffiliationInfo><Affiliation>Natural Resources Canada, Canadian Forest Service, Laurentian Forestry Centre, 1055 du P.E.P.S., PO Box 10380, Stn. Sainte-Foy, Quebec, QC, Canada G1 V 4C7.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Lachance</LastName><ForeName>Denis</ForeName><Initials>D</Initials></Author><Author ValidYN="Y"><LastName>Cloutier</LastName><ForeName>Monikca</ForeName><Initials>M</Initials></Author><Author ValidYN="Y"><LastName>Pelletier</LastName><ForeName>Gervais</ForeName><Initials>G</Initials></Author><Author ValidYN="Y"><LastName>Levasseur</LastName><ForeName>Caroline</ForeName><Initials>C</Initials></Author><Author ValidYN="Y"><LastName>Séguin</LastName><ForeName>Armand</ForeName><Initials>A</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType><PublicationType UI="D013486">Research Support, U.S. Gov't, Non-P.H.S.</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2007</Year><Month>06</Month><Day>06</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Plant J</MedlineTA><NlmUniqueID>9207397</NlmUniqueID><ISSNLinking>0960-7412</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D011993">Recombinant Fusion Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>EC 2.7.11.1</RegistryNumber><NameOfSubstance UI="D017346">Protein-Serine-Threonine Kinases</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><CommentsCorrectionsList><CommentsCorrections RefType="ErratumIn"><RefSource>Plant J. 2008 Jun;54(6):1128</RefSource></CommentsCorrections></CommentsCorrectionsList><MeshHeadingList><MeshHeading><DescriptorName UI="D017360" MajorTopicYN="N">Arabidopsis</DescriptorName><QualifierName UI="Q000201" MajorTopicYN="Y">enzymology</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D019143" MajorTopicYN="N">Evolution, Molecular</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005091" MajorTopicYN="N">Exons</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D020440" MajorTopicYN="N">Gene Duplication</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018507" MajorTopicYN="N">Gene Expression Regulation, Developmental</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018506" MajorTopicYN="N">Gene Expression Regulation, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018745" MajorTopicYN="N">Genome, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D007438" MajorTopicYN="N">Introns</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005810" MajorTopicYN="N">Multigene Family</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012275" MajorTopicYN="N">Oryza</DescriptorName><QualifierName UI="Q000201" MajorTopicYN="Y">enzymology</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D030821" MajorTopicYN="N">Plants, Genetically Modified</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000201" MajorTopicYN="Y">enzymology</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017346" MajorTopicYN="N">Protein-Serine-Threonine Kinases</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D011993" MajorTopicYN="N">Recombinant Fusion Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2007</Year><Month>9</Month><Day>22</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2007</Year><Month>12</Month><Day>6</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2007</Year><Month>9</Month><Day>22</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">17886359</ArticleId><ArticleId IdType="doi">10.1111/j.1365-313x.2007.03161.x</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Canada</li></country></list><tree><noCountry><name sortKey="Cloutier, Monikca" sort="Cloutier, Monikca" uniqKey="Cloutier M" first="Monikca" last="Cloutier">Monikca Cloutier</name><name sortKey="Lachance, Denis" sort="Lachance, Denis" uniqKey="Lachance D" first="Denis" last="Lachance">Denis Lachance</name><name sortKey="Levasseur, Caroline" sort="Levasseur, Caroline" uniqKey="Levasseur C" first="Caroline" last="Levasseur">Caroline Levasseur</name><name sortKey="Pelletier, Gervais" sort="Pelletier, Gervais" uniqKey="Pelletier G" first="Gervais" last="Pelletier">Gervais Pelletier</name><name sortKey="Seguin, Armand" sort="Seguin, Armand" uniqKey="Seguin A" first="Armand" last="Séguin">Armand Séguin</name></noCountry><country name="Canada"><noRegion><name sortKey="Vigneault, Frederic" sort="Vigneault, Frederic" uniqKey="Vigneault F" first="Frédéric" last="Vigneault">Frédéric Vigneault</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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